WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE40298 Name  PXN-1
Molecular Weight (kDa)  146.3 Length  1285
Organism  Caenorhabditis elegans MD5 Checksum  5c0a3d8564fd42ed41245432a40a73f6
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1285
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK994.3 ZK994.3 3858   V: 8494895-8495018

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
SUPERFAMILY:SSF52058
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF07679
INTERPRO:IPR013098
SMART:SM00408
INTERPRO:IPR010255
INTERPRO:IPR019791
INTERPRO:IPR037120
PFSCAN:PS50292
PRINTS:PR00457
PFAM:PF03098
SUPERFAMILY:SSF48113
HMMPANTHER:PTHR11475
INTERPRO:IPR032675
INTERPRO:IPR003591
SMART:SM00369
PFAM:PF13855
INTERPRO:IPR001611
SMART:SM00082
INTERPRO:IPR000483
SMART:SM00013
PFAM:PF01462
INTERPRO:IPR000372