WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA46757 Name  Cjp-PXN-1, isoform b
Molecular Weight (kDa)  151.2 Length  1326
Organism  Caenorhabditis japonica MD5 Checksum  e557967e42b3701957b6b8558bb650f4
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
1326
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17212b CJA17212b   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

33 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
SUPERFAMILY:SSF52058
PFSCAN:PS51257
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF07679
INTERPRO:IPR013098
SMART:SM00408
INTERPRO:IPR010255
INTERPRO:IPR019791
INTERPRO:IPR037120
PFSCAN:PS50292
PRINTS:PR00457
PFAM:PF03098
SUPERFAMILY:SSF48113
HMMPANTHER:PTHR11475
INTERPRO:IPR032675
INTERPRO:IPR003591
SMART:SM00369
PFAM:PF13855
INTERPRO:IPR001611
PFSCAN:PS51450
SMART:SM00082
INTERPRO:IPR000483
SMART:SM00013