WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0000634 pharyngeal pumping variant

Description  Any variation in the contraction and relaxation movements of the pharyngeal muscle that mediate feeding in nematodes compared to control.

9 RNAi

WormBase ID
WBRNAi00061368
WBRNAi00061369
WBRNAi00061370
WBRNAi00110227
WBRNAi00110226
WBRNAi00066136
WBRNAi00038541
WBRNAi00063526
WBRNAi00063528

17 RNAi Not Observed

WormBase ID
WBRNAi00098449
WBRNAi00069743
WBRNAi00077723
WBRNAi00066485
WBRNAi00066484
WBRNAi00066487
WBRNAi00066486
WBRNAi00066489
WBRNAi00066488
WBRNAi00079868
WBRNAi00087797
WBRNAi00066483
WBRNAi00084540
WBRNAi00065975
WBRNAi00065976
WBRNAi00098369
WBRNAi00064022

8 Children

Identifier Name Description
WBPhenotype:0000980 pharyngeal contraction variant Any variation in the muscle contractions that control feeding compared to control. Contractions are necessary for bacterial uptake from the surrounding environment.
WBPhenotype:0000378 pharyngeal pumping shallow Pharyngeal muscle contractions show less displacement than that observed in control animals.
WBPhenotype:0001006 pharyngeal pumping rate variant The number of coordinated contraction-relaxation cycles (pumps) exhibited by the pharyngeal muscle deviates from that observed for control animals.
WBPhenotype:0001281 stuffed pharynx Pharynx becomes clogged with food. In C. elegans, this is often a result of pharyngeal pumping defects.
WBPhenotype:0002442 pharyngeal pump duration increased The duration of the contraction of the pharyngeal muscle during pumping is increased compared to controls.
WBPhenotype:0001308 weak pumping The contraction and relaxation movements of the pharyngeal muscle that mediate feeding is not as robust as compared to control animals.
WBPhenotype:0000335 pharynx slippery Failure of pharyngeal contractions to trap and transport bacteria posteriorly. In C. elegans this defect results in a distention of the pharyngeal lumen.
WBPhenotype:0001004 pharyngeal relaxation variant Any variation in the relaxation of pharyngeal muscles after contraction events compared to control.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0002056 eating variant Any variation in the specific actions or reactions of an organism causing an alteration in the ingestion of food compared to control animals. In C. elegans the main food source is bacteria and alterations in eating behavior usually lead to malnutrition.

32 Phenotype Allele

Public Name
st385
st430
st554
st555
st562
e2343
ok355
e2342
ad697
ad572
ad453
ad465
ad570
ad692
e51
md125
e169
e2341
e2340
e1463
n490
ad463
ad698
ad516
ad592
ad571
ad591
ad473
ad701
ad706

96 Phenotype Allele Not Observed

Public Name
n4102
n4640
qa201
qa901
qa900
ch4
n4255
n4475
n4106
n4114
n4601
n4520
e912
n4104
gk175
n4570
n4126
n4115
n4899
n4638
n4315
n4635
gk23
n4286
n4797
tm725
n4637
n4541
n4540
n4505

1 Synonyms

Name Type
pharyngeal pumping abnormal