WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expressed in 56 cells in the hermaphrodite: the 24 amphid neurons, twelve inner labial neurons, six outer labial neurons, four CEP cells, two ADE cells, four phasmid cells in all stages from late embryo through adult; AQR and PQR at L1 through adult PDE cells at L2 through adult. Additional expression in male-specific cells: CEM cells and male tail sensory cells. Primary Identifier  Expr507
Remark  Included upstream of gfp in the fusion gene was 5.1 kb of osm-6 genomic sequence, extending from 2.4 kb upstream of the 5' end of the osm-6 cDNA through the first 10 exons and all introns into the last exon, such that only the last 13 codons, including the translational stop, of OSM-6 were lacking. Transgenic Marker: rol-6(su1006) late embryo(author) = fully-elongated embryo(curator).
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60 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASGL lineage name: ABplaapapap WBbt:0003892
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASGR lineage name: ABpraapapap WBbt:0003891
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASEL lineage name: ABalppppppaa WBbt:0003904
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASER lineage name: ABpraaapppaa WBbt:0003903
Neuron, dopaminergic of postderid sensillum PDER lineage name: V5R.paaa WBbt:0004382
Neuron, dopaminergic of postderid sensillum PDEL lineage name: V5L.paaa WBbt:0004383
Inner labial neuron IL1VL lineage name: ABalppapppaa WBbt:0004549
Inner labial neuron IL1VR lineage name: ABarapppppaa WBbt:0004547
Inner labial neuron IL1DL lineage name: ABalapappaaa WBbt:0004738
Inner labial neuron IL1DR lineage name: ABalappppaaa WBbt:0004737
Inner labial neuron IL1L lineage name: ABalapaappaa WBbt:0004553
Inner labial neuron IL1R lineage name: ABalaappppaa WBbt:0004551
Amphid neuron, prob. chemosensory ADFL lineage name: ABalpppppaa WBbt:0004003
Amphid neuron, prob. chemosensory ADFR lineage name: ABpraaappaa WBbt:0003999
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWBL lineage name: ABalpppppap WBbt:0003829
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWBR lineage name: ABpraaappap WBbt:0003828
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWCL lineage name: ABplpaaaaap WBbt:0003827
Amphid wing cells, neurons having ciliated sheet-like sensory endings closely associated with amphid sheath AWCR lineage name: ABprpaaaaap WBbt:0003826
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKL lineage name: ABalpppapppa WBbt:0003884
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKR lineage name: ABpraaaapppa WBbt:0003883
Amphid finger cell, neuron associated with amphid sheath AFDL lineage name: ABalpppapav WBbt:0003993
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASHL lineage name: ABplpaappaa WBbt:0003890
Amphid finger cell, neuron associated with amphid sheath AFDR lineage name: ABpraaaapav WBbt:0003991
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASHR lineage name: ABprpaappaa WBbt:0003889
one member of amphid neurons, single ciliated ending, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASIL lineage name: ABplaapapppa WBbt:0003888
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASIR lineage name: ABpraapapppa WBbt:0003887
Amphid neuron, prob. chemosensory ADLL lineage name: ABalppppaad WBbt:0003997
Amphid neuron, prob. chemosensory ADLR lineage name: ABpraaapaad WBbt:0003995
Phasmid neurons, probably chemosensory PHAL lineage name: ABplpppaapp WBbt:0004366

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003886 osm-6 R31.3 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021