WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Hermaphrodites carrying DOP-4::gfp showed GFP expression in pharyngeal neurons I1 and I2, neurons ASG, AVL, CAN, and PQR, vulva, intestine, rectal glands, and rectal epithelial cells. There was also weak and variable expression in several neurons in the head region. Males also showed expression in neurons in ray 8 Primary Identifier  Expr3687
Remark  Reporter gene fusion type not specified.

19 Anatomy Terms

Definition Name Synonym Primary Identifier
female genital. vulva   WBbt:0006748
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASGL lineage name: ABplaapapap WBbt:0003892
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASGR lineage name: ABpraapapap WBbt:0003891
  rectal gland cell   WBbt:0005799
Pharyngeal interneurons: ant sensory, input from RIP I1L lineage name: ABalpapppaa WBbt:0004746
Pharyngeal interneurons: ant sensory, input from RIP I1R lineage name: ABarapappaa WBbt:0004745
Pharyngeal interneurons, ant sensory. I2L lineage name: ABalpappaapa WBbt:0004744
Pharyngeal interneurons, ant sensory. I2R lineage name: ABarapapaapa WBbt:0004743
Process runs along excretory canal, no synapses, essential for survival CANL lineage name: ABalapaaapa WBbt:0004949
Process runs along excretory canal, no synapses, essential for survival CANR lineage name: ABalappappa WBbt:0004947
Neuron class of one ring and ventral cord interneuron, few synapses. AVL lineage name: ABprpappaap WBbt:0003843
epithelium connecting intestine and anus. rectal epithelium   WBbt:0005800
Male sensory rays, neuron, darkly staining tip, open to outside R8BR lineage name: TR.appaaapa WBbt:0003988
Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside. R8BL lineage name: TL.appaaapa WBbt:0003990
Post-embryonic cell of pedigree TL.appaaaaa, male sensory rays, neuron, striated rootlet. R8AL lineage name: TL.appaaaaa WBbt:0003994
Male sensory rays, neuron, striated rootlet R8AR lineage name: TR.appaaaaa WBbt:0003992

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016872 dop-4 C52B11.3 Caenorhabditis elegans

0 Life Stages