WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  lin-36::GFP was expressed in the nuclei of the P(3-8).p cells and their descendants during vulval cell determination, division and invagination. Similar observations have been made with an independently constructed lin-36::GFP reporter. Besides the P(3-8).p cells, many other cells expressed GFP in strains bearing this reporter construct. Most notably, neurons of the head, tail and ventral cord expressed lin-36::GFP throughout development, and sporadic fluorescence was infrequently observed in the germline. Very weak staining was observed in hypodermal and intestinal nuclei. Primary Identifier  Expr1154
Remark  This lin-36::GFP reporter transgene rescued the Muv phenotype of a lin-36; lin-15(n767) strain, indicating that it was expressed in cells needed for lin-36 function. Subcellular Localization  lin-36::GFP expression in all cases was localized to nuclei. The GFP reporter gene used in the construction of this reporter construct did not contain a nuclear localization sequence, but as mentioned above, the lin-36 coding region contains a potential nuclear localization sequence.
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43 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Epidermal layer. hypodermis epidermis WBbt:0005733
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
cell line which early in development becomes differentiated from the remaining somatic cell line, and alone has the potential to undergo meiosis and form gametes. germ line germline WBbt:0005784
  P6.p hermaphrodite   WBbt:0008125
descendent cell of post-embryonic blast cell P5, posterior, in hermaphrodite. P5.p hermaphrodite   WBbt:0008121
descendent cell of post-embryonic blast cell P4, posterior, in hermaphrodite. P4.p hermaphrodite   WBbt:0008117
descendent cell of post-embryonic blast cell P3, posterior in hermaphrodite. P3.p hermaphrodite   WBbt:0008112
  P8.p hermaphrodite   WBbt:0008133
  P7.p hermaphrodite   WBbt:0008129
adult vulval toroid cell, F, formed by fusion of precursors of lineage names P6.papl, P6.papr, P6.ppal and P6.ppar. vulF   WBbt:0006768
adult vulval toroid cell, E, formed by fusion of precursors of lineage names P6.paal, P6.paar, P6.pppl and P6.pppr. vulE   WBbt:0006767
cell, posteior daughter of P6.p P6.pp   WBbt:0006988
cell, anterior daughter of P6.p P6.pa   WBbt:0006987
cell, posterior descendent of P7.p P7.pp   WBbt:0006984
cell, anterior descendent of P7.p P7.pa   WBbt:0006983
post-embryonic cell of pedigree P5.pa P5.pa   WBbt:0007252
cell, anterior daughter of P6.pp P6.ppa   WBbt:0006991
cell, posterior daughter of P6.pa P6.pap   WBbt:0006990
cell, anterior daughter of P6.pa P6.paa   WBbt:0006989
post-embryonic cell of pedigree P5.ppa P5.ppa   WBbt:0007256
post-embryonic cell of pedigree P5.pp P5.pp   WBbt:0007255
post-embryonic cell of pedigree P5.pap P5.pap   WBbt:0007254
post-embryonic cell of pedigree P5.paa P5.paa   WBbt:0007253
post-embryonic cell of pedigree P7.ppp P7.ppp   WBbt:0007266
post-embryonic cell of pedigree P7.ppa P7.ppa   WBbt:0007265
post-embryonic cell of pedigree P7.pap P7.pap   WBbt:0007264
post-embryonic cell of pedigree P6.ppp P6.ppp   WBbt:0007260

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003021 lin-36 F44B9.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002