WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two marginal cell neuron of the pharynx. Name  MC neuron
Primary Identifier  WBbt:0003638 Synonym  marginal cell neuron

2 Children

Definition Name Synonym Primary Identifier
Pharyngeal neurons that synapse onto marginal cells MCL lineage name: ABalpaaappp WBbt:0004463
Pharyngeal neurons that synapse onto marginal cells MCR lineage name: ABarapaappp WBbt:0004461

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Top 300 transcripts enriched in MC neuron, MCL, MCR according to single cell RNAseq. Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. WBPaper00061340:MC

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr15558    
    Expr15369    
    Expr3759 ser-7::gfp DNA injected into C. elegans at 0.5-0.05 ng/Ul produced lines that exhibited marked GFP fluorescence in a number of pharyngeal neurons, including the MCs, M4, I2s, I3, M5 and occasionally in the M3s, I4, I6 and M2s. Strong GFP fluorescence was also observed in the vulval muscles.  
    Expr15436 unc-17(3k)  

0 Life Stages

3 Parents

Definition Name Synonym Primary Identifier
neuron of the pharyngeal nervous system. pharyngeal neuron   WBbt:0005439
posterior segment of pharyngeal corpus. metacorpus   WBbt:0003711
neuron that uses vesicular acetylcholine as a neurotransmitter. cholinergic neuron ACh neuron WBbt:0006840