WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression is seen in the cells of the E-lineage from the 8E cell stage. Consistent with this expression is seen in all intestinal cells in larvae and adults. Some anterior expression in the head hypodermis and pharynx is also occasionally seen. Primary Identifier  Expr163
Remark  Other strain-- UL844
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37 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. pharynx esophagus WBbt:0003681
embryonic cell Ear   WBbt:0006370
embryonic cell Epra   WBbt:0006321
embryonic cell Eara   WBbt:0006161
embryonic cell Epr   WBbt:0006547
embryonic cell Ealp   WBbt:0006546
embryonic cell Eprp   WBbt:0006507
embryonic cell Eplp   WBbt:0006496
embryonic cell Epla   WBbt:0006661
embryonic cell Earp   WBbt:0006646
embryonic cell Eala   WBbt:0006104
Intestinal cell of the seventh intestinal ring, right side. int7R embryonic lineage name: Eprpa WBbt:0004344
Intestinal cell of the sixth intestinal ring, left side. int6L embryonic lineage name: Eplap WBbt:0004350
Intestinal cell of the seventh intestinal ring, left side. int7L embryonic lineage name: Eplpa WBbt:0004349
Intestinal cell of the fourth intestinal ring, dorsal side. int4D embryonic lineage name: Epraa WBbt:0004346
Intestinal cell of the sixth intestinal ring, right side. int6R embryonic lineage name: Eprap WBbt:0004345
Intestinal cell of the third intestinal ring, dorsal side. int3D embryonic lineage name: Earap WBbt:0004354
Intestinal cell int2D lineage name: Earpa WBbt:0004353
Intestinal cell of the fifth intestinal ring, right side. int5R embryonic lineage name: Earpp WBbt:0004352
Intestinal cell of the fouthth intestinal ring, ventral side. int4V embryonic lineage name: Eplaa WBbt:0004351
embryonic cell Eplpp   WBbt:0005854
Intestinal cell of the third intestinal ring, ventral side. int3V embryonic lineage name: Ealap WBbt:0004359
Intestinal cell int2V lineage name: Ealpa WBbt:0004358
Intestinal cell of the fifth intestinal ring, left side. int5L embryonic lineage name: Ealpp WBbt:0004357
embryonic cell Eprpp   WBbt:0006277
embryonic cell Earaa   WBbt:0005959
embryonic cell Ealaa   WBbt:0005901
cylindrical hypodermal syncytium in the head, including hyp1-hyp6 anterior hypodermis head hypodermis WBbt:0005373
Intestinal cell int1DR lineage name: Earaad WBbt:0004356

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003669 nhr-79 T26H2.9 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003