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WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  stam-1 is expressed in many tissues, including the pharyngeal intestinal valve, several head neurons, and phasmids in both males and hermaphrodites throughout development. In males, stam-1 expression is also observed in the gonad and sensory neurons in the tail. stam-1 and pkd-2 are clearly coexpressed in male-specific ciliated CEM, ray B-type (RnB), and hook HOB sensory neurons. Primary Identifier  Expr8036
Remark  Picture: Figure 2B. stam-1, also called pqn-19.

27 Anatomy Terms

Definition Name Synonym Primary Identifier
A group of six equivalent cells forms a tightly constructed `valve` that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine. pharyngeal-intestinal valve cardia WBbt:0005767
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
neuron of phasmid sensillum phasmid neuron   WBbt:0006753
Post-embryonic cell of pedigree V6L.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BL lineage name: V6L.papppapa WBbt:0004034
Post-embryonic cell of pedigree V6R.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BR lineage name: V6R.papppapa WBbt:0004033
Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside. R8BL lineage name: TL.appaaapa WBbt:0003990
Male sensory rays, neuron, darkly staining tip, open to outside R8BR lineage name: TR.appaaapa WBbt:0003988
Post-embryonic cell of pedigree V6L.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BL lineage name: V6L.pppapapa WBbt:0004028
Post-embryonic cell of pedigree V6R.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BR lineage name: V6R.pppapapa WBbt:0004027
Neuron class of one male-specific sensory neuron associated with hook sensillum, receptor anterior to cloaca in male. HOB lineage name: P10.ppap WBbt:0004761
Post-embryonic cell of pedigree V6L.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BL lineage name: V6L.papapapa WBbt:0004040
Post-embryonic cell of pedigree V6R.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BR lineage name: V6R.papapapa WBbt:0004039
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDL lineage name: ABplaaaaaap WBbt:0004945
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDR lineage name: ABarpapaaap WBbt:0004943
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVL lineage name: ABplpaapapp WBbt:0004941
Post-embryonic cell of pedigree V5L.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BL lineage name: V5L.pppppapa WBbt:0004048
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVR lineage name: ABprpaapapp WBbt:0004939
Post-embryonic cell of pedigree V5R.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BR lineage name: V5R.pppppapa WBbt:0004046
Post-embryonic cell of pedigree TL.appapapa, male sensory rays, neuron, darkly staining tip, open to outside. R9BL lineage name: TL.appapapa WBbt:0003968
Post-embryonic cell of pedigree TL.apappapa, male sensory rays, neuron, darkly staining tip, open to outside. R7BL lineage name: TL.apappapa WBbt:0004001
Male sensory rays, neuron, darkly staining tip, open to outside R7BR lineage name: TR.apappapa WBbt:0004000
Male sensory rays, neuron, darkly staining tip, open to outside R9BR lineage name: TR.appapapa WBbt:0003966
Post-embryonic cell of pedigree V6L.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside. R5BL lineage name: V6L.ppppaapa WBbt:0004022
Post-embryonic cell of pedigree V6R.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside. R5BR lineage name: V6R.ppppaapa WBbt:0004021
Post-embryonic cell of pedigree V6L.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside. R6BL lineage name: V6L.pppppapa WBbt:0004014
Post-embryonic cell of pedigree V6R.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside. R6BR lineage name: V6R.pppppapa WBbt:0004012
gonad of a male animal, produces sperm. male gonad   WBbt:0006794

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004109 stam-1 C34G6.7 Caenorhabditis elegans

0 Life Stages