WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In the one-cell embryo, maternally provided ZF1::GFP::PKC-3 enriched at the anterior cortex, like endogenous PKC-3 (TABUSE et al. 1998), but by the 24-cell stage ZF1::GFP::PKC-3 had degraded to undetectable levels in somatic cells. Zygotically expressed ZF1::GFP::PKC-3 reappeared during the middle stages of embryogenesis at the apical surfaces of differentiating epithelia, including the epidermis, pharynx, and intestine, where itcolocalized with PAR-6. Primary Identifier  Expr14961

5 Anatomy Terms

Definition Name Synonym Primary Identifier
  pharyngeal cell   WBbt:0005460
Embryonic founder cell D lineage name: P0.pppa WBbt:0004873
Embryonic founder cell of germ line Psub4 lineage name: P0.pppp WBbt:0004421
primary cell type that forms the hypodermis. hypodermal cell   WBbt:0007846
any of 20 large epithelial cells which form a tube and are mostly situated as bilaterally symmetric pairs around the tubular lumen. Each of these cell pairs forms an intestinal ring ( II-IX int rings). The most anterior intestinal ring (int ring I), however, is made of four cells. Intestinal cells contain large nuclei with large nucleoli and numerous autofluorescent granules in their cytoplasm. intestinal cell   WBbt:0005792

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004034 pkc-3 F09E5.1 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 390-420min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo looks like a comma. A stage between bean embryo and 1.5-fold embryo. comma embryo Ce WBls:0000017
  Also called zygote. -50min till 0min of first cleavage at 20 Centigrade. Contains 1 cell. 1-cell embryo Ce WBls:0000006
Levin M, Hashimshony T, Wagner F, Yanai I. Developmental milestones punctuate gene expression in the Caenorhabditis embryo. Dev Cell. 2012 May 15;22(5):1101-8. Epub 2012 May 3. PubMed PMID: 22560298. Supplementary table 1. Fourth cleavage of the AB lineage. Contains 24 cells. 24-cell embryo Ce WBls:0000085