WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The 3.4-kb HindIII fragment is responsible for a large part of the normal embryonic ceh-13 expression pattern. If cloned into pPD107.94, a gfp reporter gene plasmid containing a minimal promoter derived from the pes-10 gene, enh3.4 was able to drive an early embryonic GFP expression pattern indistinguishable from that of the endogenous ceh-13. In comma-stage embryos, enh3.4 recapitulated a large part of the normal ceh-13 expression pattern, including expression in cells of the future VNC and embryonic dorsal hypodermal and body wall muscle cells.However, we also observed some ectopic reporter gene expression in the posterior endoderm and in a few non identified cells of the posterior part of comma-stage embryos. Primary Identifier  Expr11275
Remark  Feature : "ceh-13.enh3.4" WBsf919526
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20 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
Epidermal layer. hypodermis epidermis WBbt:0005733
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
embryonic cell ABalp   WBbt:0005865
embryonic cell ABarp   WBbt:0006653
embryonic cell ABprp   WBbt:0006451
embryonic cell Ep   WBbt:0006612
embryonic cell ABplp   WBbt:0006279
embryonic cell ABarpp   WBbt:0006046
embryonic cell ABalpp   WBbt:0006486
embryonic cell ABplap   WBbt:0006096
embryonic cell ABalap   WBbt:0006101
embryonic cell ABala   WBbt:0006707
embryonic cell ABarap   WBbt:0005903
embryonic cell ABpla   WBbt:0006341
embryonic cell ABprap   WBbt:0005922
embryonic cell ABprpp   WBbt:0006347
embryonic cell ABplpp   WBbt:0006353
embryonic cell ABara   WBbt:0006162
embryonic cell ABpra   WBbt:0006581

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023
  The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over. elongating embryo Ce WBls:0000015
  The C. elegans life stage spanning 290-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage when embryo just finished gastrulation and is enclosing. enclosing embryo Ce WBls:0000013
  The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation. gastrulating embryo Ce WBls:0000010