WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 52 expressed in: Spermatheca neck distal-most.
Primary Identifier  WBPaper00065623:52

6 Anatomy Terms

Definition Name Synonym Primary Identifier
an accordion-like tube that contains sperm and is the site of oocyte fertilization. spermatheca   WBbt:0005319
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008378 ule-3 D1054.11 Caenorhabditis elegans
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
WBGene00020476 T13B5.9 T13B5.9 Caenorhabditis elegans
WBGene00235391 F38A5.22 F38A5.22 Caenorhabditis elegans
WBGene00010196 F57C2.4 F57C2.4 Caenorhabditis elegans
WBGene00012557 Y37D8A.19 Y37D8A.19 Caenorhabditis elegans
WBGene00017541 F17E9.4 F17E9.4 Caenorhabditis elegans
WBGene00008377 D1054.10 D1054.10 Caenorhabditis elegans
WBGene00045261 H29C22.1 H29C22.1 Caenorhabditis elegans
WBGene00013867 ZC373.2 ZC373.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule