WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in head mesodermal cell, MSpppaaa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:hmc_and_homolog
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Head mesodermal cell, function unknown head mesodermal cell hmc WBbt:0004697
embryonic cell MSpppaaa   WBbt:0005951

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000035 ace-1 W09B12.1 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000534 cpi-2 R01B10.1 Caenorhabditis elegans
WBGene00000692 col-118 T11B7.3 Caenorhabditis elegans
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans
WBGene00000845 cup-4 C02C2.3 Caenorhabditis elegans
WBGene00000881 cyn-5 F31C3.1 Caenorhabditis elegans
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
WBGene00001331 erd-2.1 F09B9.3 Caenorhabditis elegans
WBGene00001430 fkb-5 C50F2.6 Caenorhabditis elegans
WBGene00001453 flp-10 T06C10.4 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001492 frm-5.1 Y38C1AB.8 Caenorhabditis elegans
WBGene00001518 gar-2 F47D12.1 Caenorhabditis elegans
WBGene00001596 gld-2 ZC308.1 Caenorhabditis elegans
WBGene00001635 gly-10 Y45F10D.3 Caenorhabditis elegans
WBGene00001643 gly-18 F22D6.11 Caenorhabditis elegans
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
WBGene00001755 gst-7 F11G11.2 Caenorhabditis elegans
WBGene00001764 gst-16 F37B1.5 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001949 hlh-2 M05B5.5 Caenorhabditis elegans
WBGene00001953 hlh-8 C02B8.4 Caenorhabditis elegans
WBGene00002012 hsp-12.3 F38E11.1 Caenorhabditis elegans
WBGene00002030 hst-3.1 F40H3.5 Caenorhabditis elegans
WBGene00002081 ina-1 F54G8.3 Caenorhabditis elegans
WBGene00002130 inx-8 ZK792.2 Caenorhabditis elegans
WBGene00002133 inx-11 W04D2.3 Caenorhabditis elegans
WBGene00002253 lbp-1 F40F4.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule