WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 31 expressed in: Coelomocytes.
Primary Identifier  WBPaper00065623:31

5 Anatomy Terms

Definition Name Synonym Primary Identifier
A free-floating spherical cell lying in the pseudocoelomic cavity of larvae and adult C. elegans which can endocytose many compounds, possibly for immune surveillance. There are six coelomocytes in adult hermaphrodites, and they display prominent cytoplasmic inclusions and vacuoles. coelomocyte   WBbt:0005751
seventh pharyngeal muscle cell layer pm7 m7 WBbt:0003721
fifth pharyngeal muscle cell layer pm5 M5 WBbt:0003737
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
sixth pharyngeal muscle cell layer pm6 m6 WBbt:0003724

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000845 cup-4 C02C2.3 Caenorhabditis elegans
WBGene00012148 inos-1 VF13D12L.1 Caenorhabditis elegans
WBGene00013514 Y73F4A.1 Y73F4A.1 Caenorhabditis elegans
WBGene00018877 aman-1 F55D10.1 Caenorhabditis elegans
WBGene00020563 T19C3.5 T19C3.5 Caenorhabditis elegans
WBGene00020585 clec-178 T19E7.1 Caenorhabditis elegans
WBGene00021981 lgc-26 Y58G8A.1 Caenorhabditis elegans
WBGene00044301 lgc-28 D2062.12 Caenorhabditis elegans
WBGene00009408 F35C12.3 F35C12.3 Caenorhabditis elegans
WBGene00013784 Y116A8C.3 Y116A8C.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule