WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, adjusted p value < 0.01 and absolute log2FC > = 1. Description  Transcripts that showed significantly decreased expression in jmjd-5(zr1234) germine comparing to in N2 germline at 25 centigrade. Positive log2FC designates downregualted genes and vice versa.
Primary Identifier  WBPaper00062156:jmjd-5(zr1234)_downregulated_germline
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
cell line which early in development becomes differentiated from the remaining somatic cell line, and alone has the potential to undergo meiosis and form gametes. germ line germline WBbt:0005784

223 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000070 acy-3 C44F1.5 Caenorhabditis elegans
WBGene00000138 amx-2 B0019.1 Caenorhabditis elegans
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000636 col-60 F22D6.10 Caenorhabditis elegans
WBGene00000658 col-83 F33A8.9 Caenorhabditis elegans
WBGene00000788 cpz-1 F32B5.8 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001136 eat-5 F13G3.8 Caenorhabditis elegans
WBGene00001159 eff-1 C26D10.5 Caenorhabditis elegans
WBGene00001187 egl-19 C48A7.1 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00001639 gly-14 M01F1.1 Caenorhabditis elegans
WBGene00001676 gpa-14 B0207.3 Caenorhabditis elegans
WBGene00001760 gst-12 F37B1.2 Caenorhabditis elegans
WBGene00001778 gst-30 ZK546.11 Caenorhabditis elegans
WBGene00001955 hlh-11 F58A4.7 Caenorhabditis elegans
WBGene00002010 hsp-6 C37H5.8 Caenorhabditis elegans
WBGene00002088 ins-5 ZK84.3 Caenorhabditis elegans
WBGene00002179 jph-1 T22C1.7 Caenorhabditis elegans
WBGene00002252 lat-2 B0286.2 Caenorhabditis elegans
WBGene00002262 ldh-1 F13D12.2 Caenorhabditis elegans
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007387 jmjd-5 C06H2.3 Caenorhabditis elegans

0 Regulated By Molecule