WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in PVPL, PVPR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:PVP
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPR lineage name: ABprppppaaa WBbt:0004078
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPL lineage name: ABplppppaaa WBbt:0004082

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000436 ceh-12 F33D11.4 Caenorhabditis elegans
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000961 dgn-1 T21B6.1 Caenorhabditis elegans
WBGene00000980 dhs-17 F29G9.6 Caenorhabditis elegans
WBGene00001101 dsh-1 C34F11.9 Caenorhabditis elegans
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
WBGene00001145 eat-16 C16C2.2 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001502 ftt-2 F52D10.3 Caenorhabditis elegans
WBGene00001586 lgc-57 C09G5.1 Caenorhabditis elegans
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
WBGene00001648 goa-1 C26C6.2 Caenorhabditis elegans
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans
WBGene00001682 gpc-2 F08B6.2 Caenorhabditis elegans
WBGene00001775 gst-27 Y53F4B.30 Caenorhabditis elegans
WBGene00001909 his-35 C50F4.13 Caenorhabditis elegans
WBGene00001911 his-37 C50F4.7 Caenorhabditis elegans
WBGene00001915 his-41 C50F4.5 Caenorhabditis elegans
WBGene00001936 his-62 F55G1.3 Caenorhabditis elegans
WBGene00001976 hmg-11 T05A7.4 Caenorhabditis elegans
WBGene00001988 hot-3 W02B8.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule