WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in MSapaaap, MSapappp, MSapapap, MSappapp, MSpppapp, MSppapap, MSppaaap, MSppappp according to single cell RNAseq.
Primary Identifier  WBPaper00061340:BWM_anterior
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8 Anatomy Terms

Definition Name Synonym Primary Identifier
Embryonic cell of pedigree MSapaaap. MSapaaap DL2 WBbt:0006306
Embryonic cell of pedigree MSppaaap. MSppaaap DR2 WBbt:0006342
Embryonic cell of pedigree MSppappp. MSppappp DR1 WBbt:0006450
Embryonic cell of pedigree MSappapp. MSappapp lineage name: MSappapp WBbt:0006469
Embryonic cell of pedigree MSpppapp. MSpppapp lineage name: MSpppapp WBbt:0006667
Embryonic cell of pedigree MSapapap. MSapapap lineage name: MSapapap WBbt:0006685
Embryonic cell of pedigree MSppapap. MSppapap lineage name: MSppapap WBbt:0005848
Embryonic cell of pedigree MSapappp. MSapappp DL1 WBbt:0006235

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000283 cah-5 R173.1 Caenorhabditis elegans
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000472 cey-1 F33A8.3 Caenorhabditis elegans
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans
WBGene00000768 cor-1 R01H10.3 Caenorhabditis elegans
WBGene00000776 cpl-1 T03E6.7 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000822 csq-1 F40E10.3 Caenorhabditis elegans
WBGene00000858 cwn-2 W01B6.1 Caenorhabditis elegans
WBGene00000942 deb-1 ZC477.9 Caenorhabditis elegans
WBGene00000964 dhp-2 C47E12.8 Caenorhabditis elegans
WBGene00000992 dhs-29 F27D9.6 Caenorhabditis elegans
WBGene00001000 dim-1 C18A11.7 Caenorhabditis elegans
WBGene00001005 dlc-1 T26A5.9 Caenorhabditis elegans
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
WBGene00001263 emb-9 K04H4.1 Caenorhabditis elegans
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
WBGene00001366 exc-5 C33D9.1 Caenorhabditis elegans
WBGene00001429 fkb-4 ZC455.10 Caenorhabditis elegans
WBGene00001430 fkb-5 C50F2.6 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
WBGene00001629 gly-4 Y116F11B.12 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule