WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%. Description  Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E.
Primary Identifier  WBPaper00044246:pgrn-1_ced-1_downregulated

0 Anatomy Terms

138 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000608 col-19 ZK1193.1 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000656 col-80 C09G5.5 Caenorhabditis elegans
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000707 col-133 F52B11.4 Caenorhabditis elegans
WBGene00000714 col-141 T15B7.5 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000732 col-159 F57B1.3 Caenorhabditis elegans
WBGene00000757 col-184 F15A2.1 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans
WBGene00001692 grd-3 W05E7.1 Caenorhabditis elegans
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans
WBGene00003175 mec-12 C44B11.3 Caenorhabditis elegans
WBGene00003497 mup-4 K07D8.1 Caenorhabditis elegans
WBGene00003515 myo-3 K12F2.1 Caenorhabditis elegans
WBGene00003604 nhr-5 Y73F8A.21 Caenorhabditis elegans
WBGene00003893 ost-1 C44B12.2 Caenorhabditis elegans
WBGene00003929 pat-2 F54F2.1 Caenorhabditis elegans
WBGene00003991 pfn-3 K03E6.6 Caenorhabditis elegans
WBGene00006553 tbx-34 Y47D3A.10 Caenorhabditis elegans
WBGene00006603 tps-2 F19H8.1 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011936 pgrn-1 T22H2.6 Caenorhabditis elegans

0 Regulated By Molecule