WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 98 expressed in: Spermatheca bag distal.
Primary Identifier  WBPaper00065623:98

6 Anatomy Terms

Definition Name Synonym Primary Identifier
an accordion-like tube that contains sperm and is the site of oocyte fertilization. spermatheca   WBbt:0005319
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of one ring interneuron, cell body in dorsorectal ganglion, inervates rectal muscles. DVB lineage name: K.p WBbt:0004822
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with ciliated endings in the posterior deirid sensilla. PDE postdeirid neuron WBbt:0006747

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00003776 nmy-1 F52B10.1 Caenorhabditis elegans
WBGene00003981 pes-8 F18G5.2 Caenorhabditis elegans
WBGene00006060 sth-1 ZC513.12 Caenorhabditis elegans
WBGene00011436 T04F3.1 T04F3.1 Caenorhabditis elegans
WBGene00011460 ttr-14 T05A10.3 Caenorhabditis elegans
WBGene00015780 C14F11.4 C14F11.4 Caenorhabditis elegans
WBGene00023451 mlc-7 K08E3.10 Caenorhabditis elegans
WBGene00044683 C36E6.8 C36E6.8 Caenorhabditis elegans
WBGene00045245 ttr-34 F09A5.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule