WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Process :

Primary Identifier  WBbiopr:00000025
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6 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes that showed lower expression in N2 than in DR1350. The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script. WBPaper00034739:N2lessDR1350
  Genes that showed higher expression in N2 than in DR1350. The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script. WBPaper00034739:N2moreDR1350
  Genes that are up or down regulated by more than 2.1 fold with the t-test p-value less than 0.01 are included in this cluster. Genes that are regulated by more than 2.1 fold with the t-test p-value less than 0.01 are included in this cluster. WBPaper00024393:strongly_regulated_dauer_genes
  Genes that showed higher expression in RIL-17 than in RIL-14. The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script. WBPaper00034739:RIL17moreRIL14
  Genes that showed lower expression in RIL-17 than in RIL-14. The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script. WBPaper00034739:RIL17lessRIL14
  Genes with expression significantly affected by TREATMENT (non-dauer vs dauer), or TREATMENT X LINE at p < 0.001. The normalised data were analysed using a two-way ANOVA, testing for each gene the effects of LINE (N2, DR1350, RIL-14, RIL-17), TREATMENT (non-dauer vs dauer larva-inducing) and the LINE TREATMENT interaction, using a published PERL script. WBPaper00034739:TreatmentAffectedGenes