WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 143 expressed in: vm2 (vulval muscle).
Primary Identifier  WBPaper00065623:143

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Set two type of vulval muscle. vm2 vulval muscle, type 2 WBbt:0006918
Neuron class of two neurons, which have ciliated endings situated immediately dorsal to the lateral inner labial sensilla in the head but have no associated sheath or socket cells; they have flattened processes in this region of the cilium. FLP   WBbt:0006828
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. LUA   WBbt:0008031

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002012 hsp-12.3 F38E11.1 Caenorhabditis elegans
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans
WBGene00006585 tni-3 T20B3.2 Caenorhabditis elegans
WBGene00006754 unc-15 F07A5.7 Caenorhabditis elegans
WBGene00006789 unc-54 F11C3.3 Caenorhabditis elegans
WBGene00016210 C29F5.1 C29F5.1 Caenorhabditis elegans
WBGene00020195 T03G6.3 T03G6.3 Caenorhabditis elegans
WBGene00019713 pqn-52 M01E11.4 Caenorhabditis elegans
WBGene00000065 act-3 T04C12.4 Caenorhabditis elegans
WBGene00012839 Y43F8C.18 Y43F8C.18 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule