WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify DEGs, Students t test and the log2 median ratio test were performed to compute t values and median ratios for all the annotated genes. The adjusted P values from each test were computed using an empirical distribution of the null hypothesis, which was obtained from random permutations of the samples. Finally, the adjusted P values from the individual tests were combined to compute the overall P values using Stouffers method , and genes with overall P < 0.05 and fold change > 1.5 were selected as DEGs. Description  Genes that showed significantly increased expression in daf-2(e1370);hel-1(gk148684) comparing to in hel-1(gk148684)
Primary Identifier  WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000036 ace-2 Y44E3A.2 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000169 aqp-1 F32A5.5 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000246 bcc-1 M7.3 Caenorhabditis elegans
WBGene00000256 bli-6 Y73B6BL.34 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000287 cal-3 M02B7.6 Caenorhabditis elegans
WBGene00000288 cal-4 T07G12.1 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000367 cca-1 C54D2.5 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000476 cfi-1 T23D8.8 Caenorhabditis elegans
WBGene00000477 cft-1 C18C4.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans

0 Regulated By Molecule