WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ILshL, ILshR, ILshDL, ILshDR, ILshVL, ILshVR, OLLshL, OLLshR, OLQshDL, OLQshDR, OLQshVL, OLQshVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:ILsh_OLLsh_OLQsh

12 Anatomy Terms

Definition Name Synonym Primary Identifier
Inner labial sheath ILshL lineage name: ABalaaaalpp WBbt:0004529
Inner labial sheath ILshVR lineage name: ABarapppaap WBbt:0004523
Quadrant outer labial sheath OLQshVL lineage name: ABalpppaaap WBbt:0004428
Quadrant outer labial sheath OLQshVR lineage name: ABpraaaaaap WBbt:0004427
Lateral outer labial sheath OLLshL lineage name: ABalpppaapd WBbt:0004443
Lateral outer labial sheath OLLshR lineage name: ABpraaaaapd WBbt:0004442
Quadrant outer labial sheath OLQshDL lineage name: ABarpaaaapa WBbt:0004430
Quadrant outer labial sheath OLQshDR lineage name: ABarpaaapaa WBbt:0004429
Inner labial sheath ILshDL lineage name: ABalaaaparr WBbt:0004533
Inner labial sheath ILshDR lineage name: ABalaaappll WBbt:0004531
Inner labial sheath ILshR lineage name: ABalaapaapp WBbt:0004527
Inner labial sheath ILshVL lineage name: ABalppapaap WBbt:0004525

298 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000225 atgp-2 C38C6.2 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000523 clc-2 C01C10.1 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000547 clp-7 Y77E11A.11 Caenorhabditis elegans
WBGene00000598 col-9 F54B11.1 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00000967 dhs-3 T02E1.5 Caenorhabditis elegans
WBGene00001001 dis-3 C04G2.6 Caenorhabditis elegans
WBGene00001204 egl-38 C04G2.7 Caenorhabditis elegans
WBGene00001362 exc-1 C46E1.3 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001413 fem-3 C01F6.4 Caenorhabditis elegans
WBGene00001477 fmo-2 K08C7.5 Caenorhabditis elegans
WBGene00001479 fmo-4 F53F4.5 Caenorhabditis elegans
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
WBGene00001547 gcy-22 T03D8.5 Caenorhabditis elegans
WBGene00001628 gly-3 ZK688.8 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001758 gst-10 Y45G12C.2 Caenorhabditis elegans
WBGene00001769 gst-21 ZK697.6 Caenorhabditis elegans
WBGene00001776 gst-28 Y53F4B.31 Caenorhabditis elegans
WBGene00001783 gst-35 Y1H11.2 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001922 his-48 B0035.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule