WormMine: AnatomyTerm WBbt:0004430

• Definition: Quadrant outer labial sheath
• Name: OLQshDL
• Primary Identifier: WBbt:0004430
• Synonym: lineage name: ABarpaaaapa

1 Children

Definition	Name	Synonym	Primary Identifier
nucleus of pedigree ABarpaaaapa	ABarpaaaapa nucleus		WBbt:0002449

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Top 300 transcripts enriched in ILshL, ILshR, ILshDL, ILshDR, ILshVL, ILshVR, OLLshL, OLLshR, OLQshDL, OLQshDR, OLQshVL, OLQshVR according to single cell RNAseq.	Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm.	WBPaper00061340:ILsh_OLLsh_OLQsh
	Single-cell RNA-Seq cell group 30_5 expressed in glia.	scVI 0.6.0	WBPaper00065841:30_5
	Single-cell RNA-Seq cell group 30_1 expressed in hypodermis.	scVI 0.6.0	WBPaper00065841:30_1
	Single-cell RNA-Seq cell group 30_2 expressed in hypodermis.	scVI 0.6.0	WBPaper00065841:30_2
	Single-cell RNA-Seq cell group 82_1 with unidentified tissue expression pattern.	scVI 0.6.0	WBPaper00065841:82_1

3 Expression Patterns

• Primary Identifier: Marker30
• Remark: Picture: Fig. 1G, 1H, Fig S1G-L.
• Pattern: Expressed in CEPsh glia and in sheath and socket glia of inner and outer labial sensilla, and of the deirid.

• Primary Identifier: Expr8681
• Remark: Picture: N.A.
• Pattern: Arcade cells are seen to express inx-13 at high levels starting around two-fold stage continuing throughout development and adulthood. inx-13 is expressed in the hypodermal cells of the animal in postembryonic stages. Expression in the alimentary canal: Strong and consistent expression in M1, M2. Weak or rare expression in intestine, rectal epithelial cells. Expression in the nervous system: Amsh, CEPsh, CEPso, ILsh, ILso, OLsh, OLso, Phsh, CAN, DVA, DVB, DVC, LUA, PHA, PHB, PLN, PVC, PVQ, PVR, M1, M2. Expression in the reproductive system: In adult stage, expressed in spermatheca, sp-ut valve.

• Primary Identifier: Expr16132
• Pattern: GFP::MLS-2 expression became detectable around the 50-cell stage of embryogenesis and was restricted to specific, reproducible sublineages of the AB blastomere, most of which gave rise to neuronal and/or glial descendants. GFP::MLS-2 was also expressed in the duct and pore lineages, but was never observed in the canal cell. In 3/3 movies, we saw that expression of GFP::MLS-2 initiated in the grandparents of the duct and pore cell. GFP::MLS- 2 expression persisted in the duct and pore cells through the ventral enclosure and 1.5-fold stages of embryonic development, during which time fates are specified via EGF-Ras- ERK signaling and the duct and pore cells stack and form tubes (Abdus-Saboor et al., 2011). By the first larval stage of development, when the duct and pore cells have achieved their mature morphologies, GFP::MLS-2 was no longer detected in the duct and pore cells.

11 Life Stages

Remark	Definition	Other Name	Public Name	Primary Identifier
	The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching.		embryo Ce	WBls:0000003
	The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo.		fully-elongated embryo Ce	WBls:0000021
	The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over.		elongating embryo Ce	WBls:0000015
	The C. elegans life stage spanning 290-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage when embryo just finished gastrulation and is enclosing.		enclosing embryo Ce	WBls:0000013
	The C. elegans life stage spanning 0-350min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 560 cells. From start of first cleavage until cleavage is over.		proliferating embryo Ce	WBls:0000004
	The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage.		3-fold embryo Ce	WBls:0000020
	The C. elegans life stage spanning 420-460min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and fold back 50%. A stage between comma embryo and 2-fold embryo.		1.5-fold embryo Ce	WBls:0000018
	The C. elegans life stage spanning 390-420min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo looks like a comma. A stage between bean embryo and 1.5-fold embryo.		comma embryo Ce	WBls:0000017
	The C. elegans life stage spanning 460-520min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and double fold. A stage between 1.5-fold embryo and 3-fold embryo.		2-fold embryo Ce	WBls:0000019
	The C. elegans life stage spanning 350-390min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. Emrbyo elongation started but have not formed comma shape yet. The shape of embryo looks like a lima bean. A stage right before comma embryo. Also called lima embryo or lima bean stage.		bean embryo Ce	WBls:0000016
	The C. elegans life stage spanning 210-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage before the fast cleavage of cells finishes.		late cleavage stage embryo Ce	WBls:0000014

4 Parents

Definition	Name	Synonym	Primary Identifier
embryonic cell	ABarpaaaap		WBbt:0006246
	OL quadrant dorsal left sensillum		WBbt:0005508
portion of anterior ganglion of somatic nervous system that is near or posteior to the metacorpus of pharynx.	anterior ganglion (post)		WBbt:0005371
outer labial sheath cell.	OL sheath cell		WBbt:0008413