WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cufflinks FPKM value >=1. Description  Transcripts uniquely expressed in the epithelial tissues surrounding the pharynx that includes the arcade and intestinal valve (AIV) cells, according to PAT-Seq analysis using Pbath-15-GFP-3XFLAG mRNA tagging.
Primary Identifier  WBPaper00050990:arcade_intestinal-valve_enriched
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Interfacial (hypodermal) cells which connect the hypodermal epithelium of the lips to the pharyngeal epithelium, firmly binding the inner tissue (the pharynx) to the outer bodywall (the hypodermis). arcade cell   WBbt:0005793
cell that makes up the pharyngeal-intestinal valve. pharyngeal-intestinal valve cell   WBbt:0007848

153 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000537 clk-2 C07H6.6 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00001021 dnj-3 C01G10.12 Caenorhabditis elegans
WBGene00001118 dyf-2 ZK520.3 Caenorhabditis elegans
WBGene00001544 gcy-19 C17F4.6 Caenorhabditis elegans
WBGene00001835 hda-2 C08B11.2 Caenorhabditis elegans
WBGene00002052 ifa-4 K05B2.3 Caenorhabditis elegans
WBGene00003384 moc-1 T06H11.4 Caenorhabditis elegans
WBGene00003442 msp-49 C34F11.6 Caenorhabditis elegans
WBGene00003714 nhr-124 C17E7.8 Caenorhabditis elegans
WBGene00003856 odr-10 C53B7.5 Caenorhabditis elegans
WBGene00004008 pgp-14 F22E10.3 Caenorhabditis elegans
WBGene00004153 pqn-71 T23F1.6 Caenorhabditis elegans
WBGene00004913 snn-1 Y38C1BA.2 Caenorhabditis elegans
WBGene00004952 spd-1 Y34D9A.4 Caenorhabditis elegans
WBGene00005526 sri-14 M01G12.1 Caenorhabditis elegans
WBGene00005932 srx-41 F59B1.7 Caenorhabditis elegans
WBGene00006058 sst-20 F54C1.9 Caenorhabditis elegans
WBGene00006374 syx-4 T01B11.3 Caenorhabditis elegans
WBGene00006467 magu-2 C01B7.4 Caenorhabditis elegans
WBGene00006576 tkr-1 C38C10.1 Caenorhabditis elegans
WBGene00006610 tre-4 F15A2.2 Caenorhabditis elegans
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
WBGene00007345 C05E7.3 C05E7.3 Caenorhabditis elegans
WBGene00007615 set-31 C15H11.5 Caenorhabditis elegans
WBGene00007644 mjl-1 C17E4.4 Caenorhabditis elegans
WBGene00007697 C24F3.2 C24F3.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

0 Regulated By Gene

0 Regulated By Molecule