WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 9_1 expressed in epithelium.
Primary Identifier  WBPaper00065841:9_1
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
cell that makes up epithelium in pharynx. pharyngeal epithelial cell pharyngeal epithelium WBbt:0005459
marginal cell, type 2. mc2   WBbt:0003708
pharyngeal epithelial cell, type 2. e2   WBbt:0003716
Pharyngeal marginal cell mc2DL lineage name: ABaraapaapp WBbt:0004298

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000391 cdd-1 C47D2.2 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001477 fmo-2 K08C7.5 Caenorhabditis elegans
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00002128 inx-6 C36H8.2 Caenorhabditis elegans
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
WBGene00002257 lbp-5 W02D3.7 Caenorhabditis elegans
WBGene00002270 lec-7 R07B1.2 Caenorhabditis elegans
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
WBGene00003375 mlp-1 T04C9.4 Caenorhabditis elegans
WBGene00003573 ncx-8 C13D9.7 Caenorhabditis elegans
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
WBGene00003609 nhr-10 B0280.8 Caenorhabditis elegans
WBGene00003624 nhr-28 C11G6.4 Caenorhabditis elegans
WBGene00003643 nhr-53 K06B4.11 Caenorhabditis elegans
WBGene00003707 nhr-117 F16B4.12 Caenorhabditis elegans
WBGene00003720 nhr-130 T01G6.8 Caenorhabditis elegans
WBGene00004008 pgp-14 F22E10.3 Caenorhabditis elegans
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans
WBGene00004144 srlf-35 R11G11.7 Caenorhabditis elegans
WBGene00004156 pqn-74 W02A2.3 Caenorhabditis elegans
WBGene00004177 srlf-37 ZK488.7 Caenorhabditis elegans
WBGene00004859 sma-5 W06B3.2 Caenorhabditis elegans
WBGene00005654 srr-3 F36D3.3 Caenorhabditis elegans
WBGene00005655 srr-4 K11D12.3 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule