WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cuffdiff was used to search for the differentially expressed genes (FDR < 0.1). Description  Transcripts that showed significantly increased expression in lin-28(RNAi) animals comparing to in control animals.
Primary Identifier  WBPaper00050234:lin-28(RNAi)_upregulated
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0 Anatomy Terms

876 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000010 aat-9 Y53H1C.1 Caenorhabditis elegans
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000196 aars-1 W02B12.6 Caenorhabditis elegans
WBGene00000199 arx-1 Y71F9AL.16 Caenorhabditis elegans
WBGene00000223 atf-7 C07G2.2 Caenorhabditis elegans
WBGene00000231 atx-2 D2045.1 Caenorhabditis elegans
WBGene00000289 cam-1 C01G6.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000409 cdk-8 F39H11.3 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000479 cgh-1 C07H6.5 Caenorhabditis elegans
WBGene00000480 cgp-1 Y38C9A.2 Caenorhabditis elegans
WBGene00000496 chs-1 T25G3.2 Caenorhabditis elegans
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000507 cit-1.1 F44B9.4 Caenorhabditis elegans
WBGene00000508 cit-1.2 F44B9.3 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000548 clr-1 F56D1.4 Caenorhabditis elegans
WBGene00000550 clu-1 F55H2.6 Caenorhabditis elegans
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
WBGene00000739 col-166 T07H6.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage. 4-days post-L4 adult hermaphrodite Ce WBls:0000067

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003014 lin-28 F02E9.2 Caenorhabditis elegans

0 Regulated By Molecule