WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cufflinks FPKM value >=1. Description  Transcripts uniquely expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging.
Primary Identifier  WBPaper00050990:NMDA-neuron_enriched
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one ventral cord interneuron, few synapses. AVG lineage name: ABprpapppap WBbt:0003850
Neuron class of two interneurons with cell bodies situated in the lateral ganglia. AVD   WBbt:0006818
Neuron class of two interneurons with cell bodies situated in the lateral ganglion close to the ring neuropile. AVE   WBbt:0006819
Neuron class of two interneuron motoneurons that innervate muscles in the head via NMJs in the nerve ring. RIM   WBbt:0005835
Neuron class of two interneurons with cell bodies situated in the lateral ganglia adjacent to the neuropile of the nerve ring. AVA   WBbt:0005842
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. PVC   WBbt:0005840

275 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000096 ahr-1 C41G7.5 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000440 ceh-17 D1007.1 Caenorhabditis elegans
WBGene00000447 ceh-24 F55B12.1 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000519 cku-70 Y47D3A.4 Caenorhabditis elegans
WBGene00000770 cpb-1 C40H1.1 Caenorhabditis elegans
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
WBGene00001121 dyf-5 M04C9.5 Caenorhabditis elegans
WBGene00001165 efn-4 F56A11.3 Caenorhabditis elegans
WBGene00001202 egl-36 R07A4.1 Caenorhabditis elegans
WBGene00001246 elo-8 Y47D3A.30 Caenorhabditis elegans
WBGene00001566 acdh-13 C28C12.9 Caenorhabditis elegans
WBGene00001593 glc-3 ZC317.3 Caenorhabditis elegans
WBGene00001616 glr-5 ZC196.7 Caenorhabditis elegans
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
WBGene00001757 gst-9 R05F9.5 Caenorhabditis elegans
WBGene00002094 ins-11 C17C3.4 Caenorhabditis elegans
WBGene00002096 ins-13 C17C3.18 Caenorhabditis elegans
WBGene00002144 inx-22 Y47G6A.2 Caenorhabditis elegans
WBGene00002146 ipp-5 C09B8.1 Caenorhabditis elegans
WBGene00002214 klc-1 M7.2 Caenorhabditis elegans
WBGene00002233 kqt-1 C25B8.1 Caenorhabditis elegans
WBGene00002239 ksr-1 F13B9.5 Caenorhabditis elegans
WBGene00002242 kvs-1 C53C9.3 Caenorhabditis elegans
WBGene00002997 lin-8 B0454.1 Caenorhabditis elegans
WBGene00003078 lsm-4 F32A5.7 Caenorhabditis elegans
WBGene00003154 mcm-2 Y17G7B.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

0 Regulated By Gene

0 Regulated By Molecule