WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 62 expressed in: e2 (pharyngeal epithelium).
Primary Identifier  WBPaper00065623:62

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
pharyngeal epithelial cell, type 2. e2   WBbt:0003716
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007200 vamp-8 B0513.9 Caenorhabditis elegans
WBGene00008628 ttr-21 F09F3.6 Caenorhabditis elegans
WBGene00013515 Y73F4A.2 Y73F4A.2 Caenorhabditis elegans
WBGene00016504 C37C3.12 C37C3.12 Caenorhabditis elegans
WBGene00021395 pnc-1 Y38C1AA.3 Caenorhabditis elegans
WBGene00016667 cpg-18 C45E5.4 Caenorhabditis elegans
WBGene00009383 idpp-16 F35B12.3 Caenorhabditis elegans
WBGene00009097 fipr-2 F23H12.9 Caenorhabditis elegans
WBGene00271606 F22F4.9 F22F4.9 Caenorhabditis elegans
WBGene00000017 abf-6 T22H6.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule