WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. Name  SIA
Primary Identifier  WBbt:0005361
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4 Children

Definition Name Synonym Primary Identifier
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIAVL lineage name: ABplpapappa WBbt:0004985
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIAVR lineage name: ABprpapappa WBbt:0004983
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIADR lineage name: ABprpapaapa WBbt:0004987
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIADL lineage name: ABplpapaapa WBbt:0004989

27 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Single-cell RNA-Seq cell group 52 expressed in: Spermatheca neck distal-most. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:52
  Single-cell RNA-Seq cell group 62 expressed in: e2 (pharyngeal epithelium). CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:62
  Single-cell RNA-Seq cell group 55 expressed in: Intestinal-rectal valve. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:55
  Single-cell RNA-Seq cell group 51 expressed in: Intestine anterior. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:51
  Single-cell RNA-Seq cell group 65 expressed in: Excretory gland. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:65
  Transcripts enriched in SIA according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:SIA_enriched
  Single-cell RNA-Seq cell group 59 expressed in: Uterine muscle . CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:59
  Single-cell RNA-Seq cell group 64 expressed in: AVB. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:64
  Single-cell RNA-Seq cell group 69 expressed in: AVA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:69
  Single-cell RNA-Seq cell group 56 expressed in: Excretory cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:56
  Single-cell RNA-Seq cell group 49 expressed in: SIA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:49
  Single-cell RNA-Seq cell group 68 expressed in: Uterine seam cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:68
  Single-cell RNA-Seq cell group 67 expressed in: PLM_ALM. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:67
  Single-cell RNA-Seq cell group 72 expressed in: GLR. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:72
  Single-cell RNA-Seq cell group 58 expressed in: Distal tip. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:58
  Single-cell RNA-Seq cell group 57 expressed in: Marginal cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:57
  Single-cell RNA-Seq cell group 70 expressed in: AVD. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:70
  Single-cell RNA-Seq cell group 71 expressed in: AVE. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:71
  Single-cell RNA-Seq cell group 63 expressed in: VC. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:63
  Single-cell RNA-Seq cell group 47 expressed in: SMB; PLN; SIA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:47
  Single-cell RNA-Seq cell group 54 expressed in: Spermatheca-Uterine junction. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:54
  Single-cell RNA-Seq cell group 60 expressed in: Uterine toroid. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:60
  Single-cell RNA-Seq cell group 61 expressed in: g1P (pharyngeal gland). CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:61
  Single-cell RNA-Seq cell group 66 expressed in: Hypodermis head. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:66
  Single-cell RNA-Seq cell group 48 expressed in: Uterine-vulval cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:48
  Single-cell RNA-Seq cell group 50 expressed in: Oocytes. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:50
  Single-cell RNA-Seq cell group 53 expressed in: Body wall muscle posterior. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:53

0 Expression Patterns

0 Life Stages

3 Parents

Definition Name Synonym Primary Identifier
neuron that uses vesicular acetylcholine as a neurotransmitter. cholinergic neuron ACh neuron WBbt:0006840
  interneuron   WBbt:0005113
neuron that has neural processes in the nerve ring. nerve ring neuron   WBbt:0006974