WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two neurons with cell bodies situated in the lumbar ganglion. Name  PLN
Primary Identifier  WBbt:0006855

2 Children

Definition Name Synonym Primary Identifier
Interneuron, associated with PLM PLNL lineage name: TL.pppap WBbt:0004102
Interneuron, associated with PLM PLNR lineage name: TR.pppap WBbt:0004098

21 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Single-cell RNA-Seq cell group 52 expressed in: Spermatheca neck distal-most. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:52
  Single-cell RNA-Seq cell group 62 expressed in: e2 (pharyngeal epithelium). CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:62
  Single-cell RNA-Seq cell group 55 expressed in: Intestinal-rectal valve. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:55
  Single-cell RNA-Seq cell group 51 expressed in: Intestine anterior. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:51
  Single-cell RNA-Seq cell group 65 expressed in: Excretory gland. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:65
  Single-cell RNA-Seq cell group 59 expressed in: Uterine muscle . CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:59
  Single-cell RNA-Seq cell group 64 expressed in: AVB. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:64
  Single-cell RNA-Seq cell group 56 expressed in: Excretory cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:56
  Transcripts enriched in PLN according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:PLN_enriched
  Single-cell RNA-Seq cell group 49 expressed in: SIA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:49
  Single-cell RNA-Seq cell group 58 expressed in: Distal tip. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:58
  Single-cell RNA-Seq cell group 57 expressed in: Marginal cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:57
  Single-cell RNA-Seq cell group 63 expressed in: VC. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:63
  Single-cell RNA-Seq cell group 47 expressed in: SMB; PLN; SIA. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:47
  Single-cell RNA-Seq cell group 54 expressed in: Spermatheca-Uterine junction. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:54
  Single-cell RNA-Seq cell group 60 expressed in: Uterine toroid. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:60
  Single-cell RNA-Seq cell group 61 expressed in: g1P (pharyngeal gland). CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:61
  Single-cell RNA-Seq cell group 66 expressed in: Hypodermis head. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:66
  Single-cell RNA-Seq cell group 48 expressed in: Uterine-vulval cells. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:48
  Single-cell RNA-Seq cell group 50 expressed in: Oocytes. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:50
  Single-cell RNA-Seq cell group 53 expressed in: Body wall muscle posterior. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:53

0 Expression Patterns

0 Life Stages

1 Parents

Definition Name Synonym Primary Identifier
neuron that uses vesicular acetylcholine as a neurotransmitter. cholinergic neuron ACh neuron WBbt:0006840