WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  RNA-seq count data were filtered for detected genes (> 10 counts across all samples) and analyzed using DESeq. 2 with Cook's cutoff filtering set to FALSE. Genes were counted as differentially expressed if they registered a Benjamini-Hochberg corrected p-value less than 0.05 and a log2-fold change greater than 1.2 between any pair-wise conditional comparison. Description  Genes that are down-regulated in wild-type N2 larvae compared to elt-2(ca15);elt-7(tm840) larvae.
Primary Identifier  WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated

0 Anatomy Terms

993 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000044 acr-5 K03F8.2 Caenorhabditis elegans
WBGene00000058 acr-19 C31H5.3 Caenorhabditis elegans
WBGene00000081 ads-1 Y50D7A.7 Caenorhabditis elegans
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
WBGene00000109 alh-3 F36H1.6 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000172 aqp-4 F40F9.9 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000215 asp-2 T18H9.2 Caenorhabditis elegans
WBGene00000216 asp-3 H22K11.1 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000219 asp-6 F21F8.7 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000372 cyp-13A7 T10B9.10 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000515 ckc-1 T27A10.3 Caenorhabditis elegans
WBGene00000541 cln-3.3 ZC190.1 Caenorhabditis elegans
WBGene00000782 cpr-2 F36D3.9 Caenorhabditis elegans
WBGene00000784 cpr-4 F44C4.3 Caenorhabditis elegans
WBGene00000785 cpr-5 W07B8.5 Caenorhabditis elegans
WBGene00000786 cpr-6 C25B8.3 Caenorhabditis elegans
WBGene00000789 cpz-2 M04G12.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

2 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001250 elt-2 C33D3.1 Caenorhabditis elegans
WBGene00015981 elt-7 C18G1.2 Caenorhabditis elegans

0 Regulated By Molecule