WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in AMsoL, AMsoR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:AMso
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Amphid socket cell, left AMsoL lineage name: ABplpaapapa WBbt:0003931
Amphid socket cell, right AMsoR lineage name: ABprpaapapa WBbt:0003929

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000071 acy-4 T01C2.1 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000199 arx-1 Y71F9AL.16 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000458 ceh-37 C37E2.5 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000547 clp-7 Y77E11A.11 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000651 col-75 K03H9.2 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000687 col-113 C34D4.15 Caenorhabditis elegans
WBGene00000747 col-174 F46C8.2 Caenorhabditis elegans
WBGene00000760 col-187 C30F2.1 Caenorhabditis elegans
WBGene00000778 cpn-2 D1069.2 Caenorhabditis elegans
WBGene00000902 daf-6 F31F6.5 Caenorhabditis elegans
WBGene00000969 dhs-5 F56D1.5 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001253 elt-6 F52C12.5 Caenorhabditis elegans
WBGene00001432 fkb-7 B0511.1 Caenorhabditis elegans
WBGene00001479 fmo-4 F53F4.5 Caenorhabditis elegans
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
WBGene00001628 gly-3 ZK688.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule