WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  For RNA-seq and tiling arrays, log2 fold changes between gene expression values of infected versus uninfected nematodes were calculated. For log2 fold changes > 0.00001 the values > 81.25th percentile were defined as up-regulated and for log2 fold changes < -0.00001 the values < 18.75th percentile were defined as down-regulated. Description  Genes with decreased expression after 24 hours of infection by P.lumniescens Fold changes shown are pathogen vs OP50.
Primary Identifier  WBPaper00038438:P.lumniescens_24hr_downregulated_TilingArray Regulated By Treatment  Bacteria infection: Photorhabdus luminescens

0 Anatomy Terms

309 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00000597 col-8 F11H8.3 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00000646 H17B01.2 H17B01.2 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000680 col-106 Y77E11A.15 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00000757 col-184 F15A2.1 Caenorhabditis elegans
WBGene00000786 cpr-6 C25B8.3 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00001103 dsl-1 W09G12.4 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001237 elc-2 W03H1.2 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001486 frh-1 F59G1.7 Caenorhabditis elegans
WBGene00001961 hlh-17 F38C2.2 Caenorhabditis elegans
WBGene00002108 ins-25 ZC334.8 Caenorhabditis elegans
WBGene00002260 lbp-8 T22G5.6 Caenorhabditis elegans
WBGene00003114 mab-23 C32C4.5 Caenorhabditis elegans
WBGene00003161 mdf-2 Y69A2AR.30 Caenorhabditis elegans
WBGene00003541 nas-22 T11F9.6 Caenorhabditis elegans
WBGene00003580 ndx-3 Y38A8.1 Caenorhabditis elegans
WBGene00003828 nuc-1 C07B5.5 Caenorhabditis elegans
WBGene00004062 pmp-5 T10H9.5 Caenorhabditis elegans
WBGene00004139 pqn-54 R09B5.5 Caenorhabditis elegans
WBGene00004151 pqn-68 T16G1.10 Caenorhabditis elegans
WBGene00004831 slo-2 F08B12.3 Caenorhabditis elegans
WBGene00004986 spp-1 T07C4.4 Caenorhabditis elegans
WBGene00004987 spp-2 T08A9.12 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041

2 Processes

Primary Identifier
WBbiopr:00000008
WBbiopr:00000039

0 Regulated By Gene

0 Regulated By Molecule