WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 125 expressed in: AFD.
Primary Identifier  WBPaper00065623:125

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of one pharyngeal interneuron. I4 neuron I4 WBbt:0004741
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two ciliated neurons that are part of the amphid sensillum; the endings of AFD have numerous villi, which poke into the amphid sheath cells. AFD   WBbt:0005662

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001543 gcy-18 ZK896.8 Caenorhabditis elegans
WBGene00007542 pyt-1 C12D8.15 Caenorhabditis elegans
WBGene00011534 T06E4.7 T06E4.7 Caenorhabditis elegans
WBGene00012281 W05E10.2 W05E10.2 Caenorhabditis elegans
WBGene00020190 guk-1 T03F1.8 Caenorhabditis elegans
WBGene00044568 ntc-1 F39C12.4 Caenorhabditis elegans
WBGene00018136 F37A4.6 F37A4.6 Caenorhabditis elegans
WBGene00011137 R08A2.7 R08A2.7 Caenorhabditis elegans
WBGene00007241 txt-12 C01G10.16 Caenorhabditis elegans
WBGene00009087 F23D12.3 F23D12.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule