WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 40 expressed in: Arcade cells and rectal gland subpopulation.
Primary Identifier  WBPaper00065623:40

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of twelve motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VA neuron   WBbt:0005339
Interfacial (hypodermal) cells which connect the hypodermal epithelium of the lips to the pharyngeal epithelium, firmly binding the inner tissue (the pharynx) to the outer bodywall (the hypodermis). arcade cell   WBbt:0005793
  rectal gland cell   WBbt:0005799
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004156 pqn-74 W02A2.3 Caenorhabditis elegans
WBGene00004174 abu-14 ZK1067.7 Caenorhabditis elegans
WBGene00010319 F59B10.3 F59B10.3 Caenorhabditis elegans
WBGene00021084 idpp-12 W08E12.3 Caenorhabditis elegans
WBGene00022417 smex-2 Y102A11A.7 Caenorhabditis elegans
WBGene00012942 idpc-1 Y47D3B.6 Caenorhabditis elegans
WBGene00021083 W08E12.2 W08E12.2 Caenorhabditis elegans
WBGene00019839 R02F11.1 R02F11.1 Caenorhabditis elegans
WBGene00044011 idpc-3 T06E4.12 Caenorhabditis elegans
WBGene00014039 ZK662.2 ZK662.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule