WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 57 expressed in: Marginal cells.
Primary Identifier  WBPaper00065623:57

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
a type of pharyngeal cell that connects basement membrane to the apices of triangle-shaped pharyngeal lumen. marginal cell   WBbt:0003673
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007516 gpx-5 C11E4.1 Caenorhabditis elegans
WBGene00010790 adh-1 K12G11.3 Caenorhabditis elegans
WBGene00013079 ttr-26 Y51A2D.11 Caenorhabditis elegans
WBGene00016033 C24A3.2 C24A3.2 Caenorhabditis elegans
WBGene00016677 C45G9.6 C45G9.6 Caenorhabditis elegans
WBGene00044554 F41E6.15 F41E6.15 Caenorhabditis elegans
WBGene00004119 pqn-31 F21C10.8 Caenorhabditis elegans
WBGene00009096 fipr-1 F23H12.8 Caenorhabditis elegans
WBGene00018538 marg-1 F47B7.7 Caenorhabditis elegans
WBGene00000016 abf-5 T22H6.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule