WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00024291 Phenotype Remark  gei-16 RNAi embryos show an elongation defect mainly
Secondary Identifier  [cgc5194]:gei-16

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
WBGene00020550 idpp-1 T17H7.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4e T17H7.4e 1431   III: 727639-727705
CDS:T17H7.4i T17H7.4i 1344   III: 727639-727705
CDS:T17H7.4j T17H7.4j 2151   III: 727639-727705
CDS:T17H7.4k T17H7.4k 1974   III: 727639-727705
CDS:T17H7.4d T17H7.4d 3093   III: 732353-732532
CDS:T17H7.1 T17H7.1 2049   III: 740688-740942
CDS:T17H7.4a T17H7.4a 1992   III: 727639-727705
CDS:T17H7.4b T17H7.4b 1812   III: 727639-727705
CDS:T17H7.4c T17H7.4c 2121   III: 727639-727705
CDS:T17H7.4g T17H7.4g 1128   III: 727639-727705
CDS:T17H7.4h T17H7.4h 1215   III: 727639-727705
CDS:T17H7.4m T17H7.4m 66   III: 730602-730667

1 Laboratories

Primary Identifier
NR

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005194

1 Strain

WormBase ID
WBStrain00034582