WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098837 Genotype  sys-1(RNAi)
Phenotype Remark  nhr-25 RNAi results in extra distal tip cells (although this phenotype was partially suppressed by sys-1 RNAi) and partially suppressed the missing distal tip cell phenotype of sys-1 RNAi Remark  (Table S3) nhr-25 RNAi. nhr-25 cDNA sequence corresponding to the yk342d8 clone used as dsRNA sequence for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.6a F11C1.6a 1719   X: 13008892-13009008
CDS:F11C1.6b F11C1.6b 1479   X: 13009481-13009499

1 Laboratories

Primary Identifier
HL

2 Phenotype

Identifier Name Description
WBPhenotype:0001656 distal tip cell development variant Any variation in the progression of the leader cell that guides and shapes the outgrowth of the gonad while crawling along the body wall to force the germline to extend into a long tubular shape over time from its formation to its mature structure compared to control.
WBPhenotype:0001927 extra distal tip cells Animals produce an excess number of distal tip cells compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028371

0 Strain