WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11C1.6a Sequence Name  F11C1.6a
Length (nt)  1719   Chromosome Location  X: 13008892-13009008
Chromosome . Primary Identifier  X Chromosome Location . Start  13008892
Chromosome Location . End  13009008
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03191 NHR-25, isoform a 64.8 572 Caenorhabditis elegans
 

Other

143 RNAi

WormBase ID
WBRNAi00095564
WBRNAi00099066
WBRNAi00038539
WBRNAi00038540
WBRNAi00044365
WBRNAi00008639
WBRNAi00038537
WBRNAi00038538
WBRNAi00025078
WBRNAi00066783
WBRNAi00065941
WBRNAi00115650
WBRNAi00115649
WBRNAi00068493
WBRNAi00068495
WBRNAi00068494
WBRNAi00068497
WBRNAi00068496
WBRNAi00068937
WBRNAi00115647
WBRNAi00091266
WBRNAi00085753
WBRNAi00115646
WBRNAi00084427
WBRNAi00084419
WBRNAi00084421
WBRNAi00084423
WBRNAi00098838
WBRNAi00084424
WBRNAi00084426

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11C1.6a 13008892 13009008 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11C1.6a 13008892 13009008 1
CDS:F11C1.6a 13009266 13009298 1
CDS:F11C1.6a 13009391 13009499 1
CDS:F11C1.6a 13010339 13010522 1
CDS:F11C1.6a 13010573 13010697 1
CDS:F11C1.6a 13010747 13011034 1
CDS:F11C1.6a 13011150 13011424 1
CDS:F11C1.6a 13011751 13011869 1
CDS:F11C1.6a 13012328 13012573 1
CDS:F11C1.6a 13012991 13013213 1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11C1.6a.2 F11C1.6a.2 2572   X: 13008493-13013964
Transcript:F11C1.6a.1 F11C1.6a.1 2474   X: 13008886-13013962