WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11C1.6b Sequence Name  F11C1.6b
Length (nt)  1479   Chromosome Location  X: 13009481-13009499
Chromosome . Primary Identifier  X Chromosome Location . Start  13009481
Chromosome Location . End  13009499
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35856 NHR-25, isoform b 55.5 492 Caenorhabditis elegans
 

Other

136 RNAi

WormBase ID
WBRNAi00095564
WBRNAi00099066
WBRNAi00038539
WBRNAi00038540
WBRNAi00044365
WBRNAi00008639
WBRNAi00038537
WBRNAi00038538
WBRNAi00025078
WBRNAi00066783
WBRNAi00065941
WBRNAi00068493
WBRNAi00068495
WBRNAi00068494
WBRNAi00068497
WBRNAi00068496
WBRNAi00068937
WBRNAi00091266
WBRNAi00085753
WBRNAi00084427
WBRNAi00084419
WBRNAi00084421
WBRNAi00084423
WBRNAi00098838
WBRNAi00084424
WBRNAi00084426
WBRNAi00084425
WBRNAi00115871
WBRNAi00099065
WBRNAi00099064

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11C1.6b 13009481 13009499 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11C1.6b 13009481 13009499 1
CDS:F11C1.6b 13010339 13010522 1
CDS:F11C1.6b 13010573 13010697 1
CDS:F11C1.6b 13010747 13011034 1
CDS:F11C1.6b 13011150 13011424 1
CDS:F11C1.6b 13011751 13011869 1
CDS:F11C1.6b 13012328 13012573 1
CDS:F11C1.6b 13012991 13013213 1

1 Sequence

Length
1479

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11C1.6b.1 F11C1.6b.1 2353   X: 13009266-13013964