WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098820 Genotype  lag-2::GFP; cdh-3::GFP
Phenotype Remark  nhr-25 RNAi results in extra distal tip cells and no anchor cell Remark  (Figure 1B, Table 1, S1, S3) nhr-25 RNAi. nhr-25 cDNA sequence corresponding to the yk342d8 clone used as dsRNA sequence for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.6a F11C1.6a 1719   X: 13008892-13009008
CDS:F11C1.6b F11C1.6b 1479   X: 13009481-13009499

1 Laboratories

Primary Identifier
HL

2 Phenotype

Identifier Name Description
WBPhenotype:0002136 no anchor cell Animals are missing the anchor cell. In C. elegans the anchor cell is a key organizer of vulval patterning and morphogenesis.
WBPhenotype:0001927 extra distal tip cells Animals produce an excess number of distal tip cells compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028371

0 Strain