WormMine: MRNA Transcript:F54A5.3a.1

• WormMine ID: Transcript:F54A5.3a.1
• Sequence Name: F54A5.3a.1
• Length (nt): 1624
• Chromosome Location: I: 969088-973133
• Chromosome . Primary Identifier: I
• Chromosome Location . Start: 969088
• Chromosome Location . End: 973133
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F54A5.3a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00018788	shc-1	F54A5.3	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F54A5.3a	F54A5.3a	951	I: 969680-969838

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F54A5.3a.1
• Start: 969088
• End: 973133
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

6 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon1909			751	I: 969088-969838	Caenorhabditis elegans
Exon1920			91	I: 969893-969983	Caenorhabditis elegans
Exon1929			491	I: 971460-971950	Caenorhabditis elegans
Exon1938			73	I: 972648-972720	Caenorhabditis elegans
Exon1946			71	I: 972867-972937	Caenorhabditis elegans
Exon1953			147	I: 972987-973133	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F54A5.3a.1
• Start: 969088
• End: 973133
• Strand: -1

1 Sequence

• Length: 1624

1 Sequence Ontology Term

• Name: transcript