WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12C11.4b.1 Sequence Name  K12C11.4b.1
Length (nt)  3795   Chromosome Location  I: 1308011-1328151
Chromosome . Primary Identifier  I Chromosome Location . Start  1308011
Chromosome Location . End  1328151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12C11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003400 dapk-1 K12C11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12C11.4b K12C11.4b 3795   I: 1308011-1308198

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.4b.1 1308011 1328151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2402   188   I: 1308011-1308198 Caenorhabditis elegans
Exon2404   497   I: 1309106-1309602 Caenorhabditis elegans
Exon2406   302   I: 1310989-1311290 Caenorhabditis elegans
Exon2409   99   I: 1312839-1312937 Caenorhabditis elegans
Exon2413   198   I: 1320040-1320237 Caenorhabditis elegans
Exon2417   276   I: 1320348-1320623 Caenorhabditis elegans
Exon2421   550   I: 1321782-1322331 Caenorhabditis elegans
Exon2425   452   I: 1323279-1323730 Caenorhabditis elegans
Exon2429   432   I: 1324579-1325010 Caenorhabditis elegans
Exon2432   537   I: 1326073-1326609 Caenorhabditis elegans
Exon2435   264   I: 1327888-1328151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.4b.1 1308011 1328151 1

1 Sequence

Length
3795

1 Sequence Ontology Term

Identifier Name Description
transcript