WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K12C11.4b Sequence Name  K12C11.4b
Length (nt)  3795   Chromosome Location  I: 1308011-1308198
Chromosome . Primary Identifier  I Chromosome Location . Start  1308011
Chromosome Location . End  1308198
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12C11.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49530 DAPK-1, isoform b 140.8 1264 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00034311
WBRNAi00050650
WBRNAi00003987
WBRNAi00076574
WBRNAi00116621

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:K12C11.4b 1308011 1308198 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003400 dapk-1 K12C11.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:K12C11.4b 1308011 1308198 1
CDS:K12C11.4b 1309106 1309602 1
CDS:K12C11.4b 1310989 1311290 1
CDS:K12C11.4b 1312839 1312937 1
CDS:K12C11.4b 1320040 1320237 1
CDS:K12C11.4b 1320348 1320623 1
CDS:K12C11.4b 1321782 1322331 1
CDS:K12C11.4b 1323279 1323730 1
CDS:K12C11.4b 1324579 1325010 1
CDS:K12C11.4b 1326073 1326609 1
CDS:K12C11.4b 1327888 1328151 1

1 Sequence

Length
3795

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K12C11.4b.1 K12C11.4b.1 3795   I: 1308011-1328151