WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K10C3.6e Sequence Name  K10C3.6e
Length (nt)  1065   Chromosome Location  I: 9872822-9873046
Chromosome . Primary Identifier  I Chromosome Location . Start  9872822
Chromosome Location . End  9873046
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C3.6e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45522 NHR-49, isoform e 39.0 354 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00102848
WBRNAi00102849
WBRNAi00034245
WBRNAi00050502
WBRNAi00025936
WBRNAi00025937
WBRNAi00064636
WBRNAi00003976
WBRNAi00025938
WBRNAi00118015
WBRNAi00114385
WBRNAi00071048
WBRNAi00113001
WBRNAi00113231
WBRNAi00114381
WBRNAi00107530
WBRNAi00064840
WBRNAi00064533
WBRNAi00116851
WBRNAi00086179
WBRNAi00086181
WBRNAi00086192
WBRNAi00086193
WBRNAi00102843
WBRNAi00087886
WBRNAi00110686
WBRNAi00092842
WBRNAi00107233
WBRNAi00103796
WBRNAi00086188

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K10C3.6e 9872822 9873046 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003639 nhr-49 K10C3.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:K10C3.6e 9872822 9873046 1
CDS:K10C3.6e 9873099 9873662 1
CDS:K10C3.6e 9873711 9873821 1
CDS:K10C3.6e 9873960 9874124 1

1 Sequence

Length
1065

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K10C3.6e.1 K10C3.6e.1 1065   I: 9872822-9874124