WormMine: Gene WBGene00255736

• WormBase Gene ID: WBGene00255736
• Gene Name: C03H5.10
• Sequence Name: C03H5.10
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in AS neuron; AS1; AVBL; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by unc-30; etr-1; and ilc-17.1 based on RNA-seq studies. Is affected by Doxycycline based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 797

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00255736

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C03H5.10	C03H5.10	752	II: 395098-395894

Other

0 CDSs

18 RNAi Result

• WBRNAi00095612
• WBRNAi00025443
• WBRNAi00000052
• WBRNAi00000178
• WBRNAi00025444
• WBRNAi00081419
• WBRNAi00064947
• WBRNAi00093743
• WBRNAi00075722
• WBRNAi00046759
• WBRNAi00117165
• WBRNAi00116411
• WBRNAi00085328
• WBRNAi00079186
• WBRNAi00079198
• WBRNAi00079227
• WBRNAi00116368
• WBRNAi00110845

19 Allele

• gk964317
• gk963801
• gk131505
• gk131506
• gk131507
• ttTi12283
• WBVar02039888
• WBVar02120585
• ttTi34532
• gk831270
• gk606203
• gk918985
• gk599617
• gk622839
• gk510087
• WBVar00009371
• WBVar01291541
• WBVar01291542
• WBVar01682198

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00255736
• Start: 395098
• End: 395894
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_395895..396558
• Length (nt): 664
• Chromosome Location: II: 395895-396558
• Organism: Caenorhabditis elegans

9 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly higher expression in somatic gonad precursor cells (SGP) vs. head mesodermal cells (hmc).	DESeq2, fold change >= 2, FDR <= 0.01.	WBPaper00056826:SGP_biased
	Transcripts that showed significantly decreased expression in N2 day 4 adults comparing to in N2 day 1 adult animals according to Illumina RNASeq.	DESeq fold change > 2, FDR < 0.05.	WBPaper00067499:Day4_vs_Day1_downregulated_Illumina
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated
	Transcripts that showed significantly increased expression in unc-30(ok613) animals at L4 larva stage, comparing to N2 animals.	Genes exhibiting at least two-fold change were considered differentially expressed.	WBPaper00061439:unc-30(ok613)_upregulated
	Transcripts that showed significantly increased expression in unc-30(ok613) animals at L4 larva stage after 4 hours of Pseudomonas aeruginosa infection, comparing to infected N2 animals.	Genes exhibiting at least two-fold change were considered differentially expressed.	WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
	Transcripts that showed significantly decreased expression in CB4856 animals growing in 15mg per mL doxycycline from L1 to L4 larva stage.	edgeR (version 3.24.3), fold change > 4, FDR < 0.01.	WBPaper00062456:doxycycline_downregulated_CB4856_transcript
	Transcripts of noncoding genes that showed significantly increased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_enriched_noncoding-RNA
	Single-cell RNA-Seq cell group 86_0 expressed in neuron.	scVI 0.6.0	WBPaper00065841:86_0
	Single-cell RNA-Seq cell group 132_0 expressed in neuron.	scVI 0.6.0	WBPaper00065841:132_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00255736
• Start: 395098
• End: 395894
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 797

1 Sequence Ontology Term