WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04A2.7c Sequence Name  C04A2.7c
Length (nt)  2739   Chromosome Location  II: 6853884-6853990
Chromosome . Primary Identifier  II Chromosome Location . Start  6853884
Chromosome Location . End  6853990
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.7c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29659 DNJ-5, isoform c 102.3 912 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00039572
WBRNAi00076072
WBRNAi00039573
WBRNAi00085036
WBRNAi00106321
WBRNAi00028413
WBRNAi00061979

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04A2.7c 6853884 6853990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04A2.7c 6853884 6853990 -1
CDS:C04A2.7c 6854041 6854143 -1
CDS:C04A2.7c 6854194 6854265 -1
CDS:C04A2.7c 6855253 6855354 -1
CDS:C04A2.7c 6855403 6855570 -1
CDS:C04A2.7c 6855617 6855733 -1
CDS:C04A2.7c 6855785 6856236 -1
CDS:C04A2.7c 6856283 6856465 -1
CDS:C04A2.7c 6856509 6856875 -1
CDS:C04A2.7c 6856962 6857197 -1
CDS:C04A2.7c 6857250 6857460 -1
CDS:C04A2.7c 6857506 6857649 -1
CDS:C04A2.7c 6857702 6857869 -1
CDS:C04A2.7c 6857919 6858121 -1
CDS:C04A2.7c 6858167 6858272 -1

1 Sequence

Length
2739

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04A2.7c.1 C04A2.7c.1 3178   II: 6853461-6858288