WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04A2.7b Sequence Name  C04A2.7b
Length (nt)  2550   Chromosome Location  II: 6854829-6854847
Chromosome . Primary Identifier  II Chromosome Location . Start  6854829
Chromosome Location . End  6854847
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29658 DNJ-5, isoform b 94.8 849 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00039572
WBRNAi00076072
WBRNAi00039573
WBRNAi00085036
WBRNAi00106321
WBRNAi00028413
WBRNAi00061979

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04A2.7b 6854829 6854847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04A2.7b 6854829 6854847 -1
CDS:C04A2.7b 6854968 6855038 -1
CDS:C04A2.7b 6855253 6855354 -1
CDS:C04A2.7b 6855403 6855570 -1
CDS:C04A2.7b 6855617 6855733 -1
CDS:C04A2.7b 6855785 6856236 -1
CDS:C04A2.7b 6856283 6856465 -1
CDS:C04A2.7b 6856509 6856875 -1
CDS:C04A2.7b 6856962 6857197 -1
CDS:C04A2.7b 6857250 6857460 -1
CDS:C04A2.7b 6857506 6857652 -1
CDS:C04A2.7b 6857702 6857869 -1
CDS:C04A2.7b 6857919 6858121 -1
CDS:C04A2.7b 6858167 6858272 -1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04A2.7b.1 C04A2.7b.1 3046   II: 6854362-6858301