WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W02B12.3b Sequence Name  W02B12.3b
Length (nt)  447   Chromosome Location  II: 11453981-11454103
Chromosome . Primary Identifier  II Chromosome Location . Start  11453981
Chromosome Location . End  11454103
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02B12.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32944 RSP-1, isoform b 16.5 148 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00081504
WBRNAi00054556
WBRNAi00066331
WBRNAi00063945
WBRNAi00066330
WBRNAi00066413
WBRNAi00066414
WBRNAi00019488
WBRNAi00068303
WBRNAi00036173
WBRNAi00066329
WBRNAi00068300
WBRNAi00068276
WBRNAi00068277
WBRNAi00068278
WBRNAi00068279
WBRNAi00068281
WBRNAi00068283
WBRNAi00068284
WBRNAi00068285
WBRNAi00068286
WBRNAi00068293
WBRNAi00068298
WBRNAi00068295
WBRNAi00062395
WBRNAi00081529
WBRNAi00066336
WBRNAi00069873

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W02B12.3b 11453981 11454103 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004698 rsp-1 W02B12.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:W02B12.3b 11453981 11454103 1
CDS:W02B12.3b 11454157 11454389 1
CDS:W02B12.3b 11454441 11454513 1
CDS:W02B12.3b 11454642 11454659 1

1 Sequence

Length
447

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W02B12.3b.3 W02B12.3b.3 1515   II: 11453974-11455819
Transcript:W02B12.3b.1 W02B12.3b.1 1395   II: 11453980-11455808
Transcript:W02B12.3b.2 W02B12.3b.2 1545   II: 11453980-11455808